Dimerization domain of the human polyoma, JC virus agnoprotein is an AMPhipathic alpha-helix
Organism: JC polyomavirus
Model: Experimental
Representation: Coarse-grained
Type: α-helical
Pfam Acc: PF01736
PDB ID: 2MJ2
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 20.0 Å
Number of TM segments = 1
Sequence positions:
A: 2-34
Tilt angles:
A - Segment: 2-34 - Tilt: 58.5°
Structural assessment:
MAIDEN score = -2.0679
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]