Structural insights of TM domain of LAMP-2A in DPC micelles
Organism: Homo sapiens
Model: Experimental
Representation: Atomistic
Type: α-helical
Pfam Acc: PF01299
PDB ID: 2MOM
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 22.0 Å
Number of TM segments = 3
Sequence positions:
A: 375-400
C: 370-406
B: 385-406
Tilt angles:
A - Segment: 375-400 - Tilt: 62.2°
C - Segment: 370-406 - Tilt: 64.1°
B - Segment: 385-406 - Tilt: 65.9°
Structural assessment:
MAIDEN score = -28.1615
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]