Structural insights of TM domain of LAMP-2A in DPC micelles
Organism: Homo sapiens
Model: Experimental
Representation: Coarse-grained
Type: α-helical
Pfam Acc: PF01299
PDB ID: 2MOM
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 21.0 Å
Number of TM segments = 3
Sequence positions:
A: 6-32
C: 86-122
B: 58-80
Tilt angles:
A - Segment: 6-32 - Tilt: 60.8°
C - Segment: 86-122 - Tilt: 62.9°
B - Segment: 58-80 - Tilt: 60.8°
Structural assessment:
MAIDEN score = -32.9195
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]