GlpG, a Rhomboid family intramembrane protease
Organism: Escherichia coli
Model: Experimental
Representation: Atomistic
Type: α-helical
Pfam Acc: PF01694
PDB ID: 2NRF
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 21.0 Å
Number of TM segments = 10
Sequence positions:
A: 99-116|133-158|175-189|197-210|230-246|248-264
B: 96-113|134-159|174-187|198-213
Tilt angles:
A - Segment: 99-116 - Tilt: 16.6°
A - Segment: 133-158 - Tilt: 52.6°
A - Segment: 175-189 - Tilt: 20.5°
A - Segment: 197-210 - Tilt: 35.1°
A - Segment: 230-246 - Tilt: 16.2°
A - Segment: 248-264 - Tilt: 47.7°
B - Segment: 96-113 - Tilt: 43.9°
B - Segment: 134-159 - Tilt: 47.5°
B - Segment: 174-187 - Tilt: 10.1°
B - Segment: 198-213 - Tilt: 48.0°
Structural assessment:
MAIDEN score = -92.2302
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]