GltPh in complex with L-Asp
Organism: Pyrococcus horikoshii
Model: Experimental
Representation: Atomistic
Type: α-helical
Pfam Acc: PF00375
PDB ID: 2NWL
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 24.0 Å
Number of TM segments = 24
Sequence positions:
A: 13-27|42-63|79-100|130-160|200-216|236-253|299-316|394-412
C: 13-28|42-63|82-103|129-158|200-217|233-250|301-319|391-408
B: 15-30|39-63|82-104|130-160|204-218|232-250|301-320|390-408
Tilt angles:
A - Segment: 13-27 - Tilt: 11.2°
A - Segment: 42-63 - Tilt: 57.1°
A - Segment: 79-100 - Tilt: 43.4°
A - Segment: 130-160 - Tilt: 16.8°
A - Segment: 200-216 - Tilt: 20.8°
A - Segment: 236-253 - Tilt: 36.4°
A - Segment: 299-316 - Tilt: 27.5°
A - Segment: 394-412 - Tilt: 37.2°
C - Segment: 13-28 - Tilt: 13.0°
C - Segment: 42-63 - Tilt: 53.3°
C - Segment: 82-103 - Tilt: 49.2°
C - Segment: 129-158 - Tilt: 26.0°
C - Segment: 200-217 - Tilt: 31.7°
C - Segment: 233-250 - Tilt: 30.0°
C - Segment: 301-319 - Tilt: 37.3°
C - Segment: 391-408 - Tilt: 34.2°
B - Segment: 15-30 - Tilt: 14.4°
B - Segment: 39-63 - Tilt: 57.5°
B - Segment: 82-104 - Tilt: 48.0°
B - Segment: 130-160 - Tilt: 23.3°
B - Segment: 204-218 - Tilt: 28.6°
B - Segment: 232-250 - Tilt: 34.0°
B - Segment: 301-320 - Tilt: 42.0°
B - Segment: 390-408 - Tilt: 32.5°
Structural assessment:
MAIDEN score = -116.8108
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]