GltPh in complex with L-Asp
Organism: Pyrococcus horikoshii
Model: Experimental
Representation: Coarse-grained
Type: α-helical
Pfam Acc: PF00375
PDB ID: 2NWL
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 23.0 Å
Number of TM segments = 24
Sequence positions:
A: 5-20|30-54|73-94|116-144|187-204|218-236|287-303|377-394
C: 803-817|833-854|870-890|917-947|987-1001|1023-1040|1086-1103|1181-1198
B: 406-420|435-456|475-496|513-542|584-599|617-634|685-701|775-792
Tilt angles:
A - Segment: 5-20 - Tilt: 17.6°
A - Segment: 30-54 - Tilt: 56.0°
A - Segment: 73-94 - Tilt: 52.7°
A - Segment: 116-144 - Tilt: 26.6°
A - Segment: 187-204 - Tilt: 30.9°
A - Segment: 218-236 - Tilt: 33.2°
A - Segment: 287-303 - Tilt: 39.3°
A - Segment: 377-394 - Tilt: 40.6°
C - Segment: 803-817 - Tilt: 9.8°
C - Segment: 833-854 - Tilt: 56.2°
C - Segment: 870-890 - Tilt: 46.4°
C - Segment: 917-947 - Tilt: 17.1°
C - Segment: 987-1001 - Tilt: 25.4°
C - Segment: 1023-1040 - Tilt: 34.8°
C - Segment: 1086-1103 - Tilt: 28.5°
C - Segment: 1181-1198 - Tilt: 35.6°
B - Segment: 406-420 - Tilt: 8.8°
B - Segment: 435-456 - Tilt: 52.6°
B - Segment: 475-496 - Tilt: 47.7°
B - Segment: 513-542 - Tilt: 26.3°
B - Segment: 584-599 - Tilt: 22.8°
B - Segment: 617-634 - Tilt: 27.4°
B - Segment: 685-701 - Tilt: 35.6°
B - Segment: 775-792 - Tilt: 33.5°
Structural assessment:
MAIDEN score = -93.6595
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]