GltPh in complex with TBOA
Organism: Pyrococcus horikoshii
Model: Experimental
Representation: Atomistic
Type: α-helical
Pfam Acc: PF00375
PDB ID: 2NWW
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 24.0 Å
Number of TM segments = 24
Sequence positions:
A: 12-27|42-63|79-99|130-160|200-216|236-253|299-316|394-412
C: 13-29|42-63|82-104|128-158|201-217|232-250|301-319|391-408
B: 15-31|38-63|82-103|130-160|204-218|232-250|301-319|391-408
Tilt angles:
A - Segment: 12-27 - Tilt: 7.4°
A - Segment: 42-63 - Tilt: 56.2°
A - Segment: 79-99 - Tilt: 48.2°
A - Segment: 130-160 - Tilt: 18.2°
A - Segment: 200-216 - Tilt: 22.5°
A - Segment: 236-253 - Tilt: 37.4°
A - Segment: 299-316 - Tilt: 26.9°
A - Segment: 394-412 - Tilt: 37.5°
C - Segment: 13-29 - Tilt: 22.2°
C - Segment: 42-63 - Tilt: 53.9°
C - Segment: 82-104 - Tilt: 44.8°
C - Segment: 128-158 - Tilt: 20.0°
C - Segment: 201-217 - Tilt: 37.8°
C - Segment: 232-250 - Tilt: 31.0°
C - Segment: 301-319 - Tilt: 38.5°
C - Segment: 391-408 - Tilt: 36.0°
B - Segment: 15-31 - Tilt: 9.1°
B - Segment: 38-63 - Tilt: 56.2°
B - Segment: 82-103 - Tilt: 54.7°
B - Segment: 130-160 - Tilt: 22.2°
B - Segment: 204-218 - Tilt: 27.5°
B - Segment: 232-250 - Tilt: 39.2°
B - Segment: 301-319 - Tilt: 39.3°
B - Segment: 391-408 - Tilt: 44.1°
Structural assessment:
MAIDEN score = -101.3380
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]