GltPh in complex with TBOA
Organism: Pyrococcus horikoshii
Model: Experimental
Representation: Coarse-grained
Type: α-helical
Pfam Acc: PF00375
PDB ID: 2NWW
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 24.0 Å
Number of TM segments = 24
Sequence positions:
A: 5-21|29-51|73-94|119-148|192-209|223-241|292-310|381-399
C: 819-835|843-865|887-908|933-962|1006-1023|1037-1055|1106-1124|1195-1213
B: 412-428|436-458|480-501|526-555|599-616|630-648|699-717|788-806
Tilt angles:
A - Segment: 5-21 - Tilt: 14.5°
A - Segment: 29-51 - Tilt: 49.0°
A - Segment: 73-94 - Tilt: 50.2°
A - Segment: 119-148 - Tilt: 19.1°
A - Segment: 192-209 - Tilt: 28.9°
A - Segment: 223-241 - Tilt: 33.0°
A - Segment: 292-310 - Tilt: 36.4°
A - Segment: 381-399 - Tilt: 32.9°
C - Segment: 819-835 - Tilt: 14.2°
C - Segment: 843-865 - Tilt: 48.8°
C - Segment: 887-908 - Tilt: 49.8°
C - Segment: 933-962 - Tilt: 19.0°
C - Segment: 1006-1023 - Tilt: 28.1°
C - Segment: 1037-1055 - Tilt: 33.4°
C - Segment: 1106-1124 - Tilt: 35.9°
C - Segment: 1195-1213 - Tilt: 32.5°
B - Segment: 412-428 - Tilt: 14.7°
B - Segment: 436-458 - Tilt: 49.2°
B - Segment: 480-501 - Tilt: 49.7°
B - Segment: 526-555 - Tilt: 18.7°
B - Segment: 599-616 - Tilt: 28.3°
B - Segment: 630-648 - Tilt: 34.1°
B - Segment: 699-717 - Tilt: 35.7°
B - Segment: 788-806 - Tilt: 33.3°
Structural assessment:
MAIDEN score = -74.8294
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]