Pentameric ligand gated ion channel from erwinia chrysanthemi (ELIC)
Organism: Erwinia chrysanthemi
Model: Experimental
Representation: Coarse-grained
Type: α-helical
Pfam Acc: PF02932
PDB ID: 2VL0
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 29.4 Å
Number of TM segments = 18
Sequence positions:
A: 198-214|216-235|253-272
C: 809-826|828-847|865-884
B: 503-520|522-541|559-578|591-611
E: 1422-1438|1440-1459|1477-1496|1509-1529
D: 1115-1132|1134-1153|1171-1190|1203-1223
Tilt angles:
A - Segment: 198-214 - Tilt: 14.9°
A - Segment: 216-235 - Tilt: 3.2°
A - Segment: 253-272 - Tilt: 13.1°
C - Segment: 809-826 - Tilt: 11.4°
C - Segment: 828-847 - Tilt: 3.3°
C - Segment: 865-884 - Tilt: 12.6°
B - Segment: 503-520 - Tilt: 11.8°
B - Segment: 522-541 - Tilt: 3.0°
B - Segment: 559-578 - Tilt: 12.8°
B - Segment: 591-611 - Tilt: 14.9°
E - Segment: 1422-1438 - Tilt: 14.4°
E - Segment: 1440-1459 - Tilt: 3.8°
E - Segment: 1477-1496 - Tilt: 12.7°
E - Segment: 1509-1529 - Tilt: 14.2°
D - Segment: 1115-1132 - Tilt: 11.5°
D - Segment: 1134-1153 - Tilt: 3.6°
D - Segment: 1171-1190 - Tilt: 12.5°
D - Segment: 1203-1223 - Tilt: 14.3°
Structural assessment:
MAIDEN score = -192.8977
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]