Polysulfide reductase with bound quinone (UQ1)
Organism: Thermus thermophilus
Model: Experimental
Representation: Atomistic
Type: α-helical
Pfam Acc: PF03916
PDB ID: 2VPX
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 30.0 Å
Number of TM segments = 16
Sequence positions:
C: 14-38|49-68|87-108|110-136|146-166|172-193|206-223|225-244
G: 14-39|48-67|86-107|109-135|145-165|171-192|205-222|224-243
Tilt angles:
C - Segment: 14-38 - Tilt: 28.2°
C - Segment: 49-68 - Tilt: 24.2°
C - Segment: 87-108 - Tilt: 21.9°
C - Segment: 110-136 - Tilt: 40.8°
C - Segment: 146-166 - Tilt: 30.4°
C - Segment: 172-193 - Tilt: 20.9°
C - Segment: 206-223 - Tilt: 9.6°
C - Segment: 225-244 - Tilt: 14.9°
G - Segment: 14-39 - Tilt: 41.5°
G - Segment: 48-67 - Tilt: 23.4°
G - Segment: 86-107 - Tilt: 22.8°
G - Segment: 109-135 - Tilt: 40.1°
G - Segment: 145-165 - Tilt: 30.4°
G - Segment: 171-192 - Tilt: 23.0°
G - Segment: 205-222 - Tilt: 8.3°
G - Segment: 224-243 - Tilt: 11.8°
Structural assessment:
MAIDEN score = -141.7077
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]