P pilus usher (PAPC) translocation pore
Organism: Escherichia coli
Model: Experimental
Representation: Atomistic
Type: β-sheet
Pfam Acc: PF00577
PDB ID: 2VQI
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 20.0 Å
Number of TM segments = 14
Sequence positions:
A: 370-377|385-391|399-405|419-424|440-445|464-472
B: 336-347|358-366|371-377|384-390|400-406|418-423|441-446|464-471
Tilt angles:
A - Segment: 370-377 - Tilt: 48.0°
A - Segment: 385-391 - Tilt: 30.9°
A - Segment: 399-405 - Tilt: 19.2°
A - Segment: 419-424 - Tilt: 7.6°
A - Segment: 440-445 - Tilt: 8.9°
A - Segment: 464-472 - Tilt: 33.6°
B - Segment: 336-347 - Tilt: 63.8°
B - Segment: 358-366 - Tilt: 50.4°
B - Segment: 371-377 - Tilt: 41.2°
B - Segment: 384-390 - Tilt: 28.5°
B - Segment: 400-406 - Tilt: 21.1°
B - Segment: 418-423 - Tilt: 13.3°
B - Segment: 441-446 - Tilt: 18.1°
B - Segment: 464-471 - Tilt: 33.5°
Structural assessment:
MAIDEN score = 64.7618
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]