P pilus usher (PAPC) translocation pore
Organism: Escherichia coli
Model: Experimental
Representation: Coarse-grained
Type: β-sheet
Pfam Acc: PF00577
PDB ID: 2VQI
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 20.0 Å
Number of TM segments = 16
Sequence positions:
A: 184-199|204-214|217-224|231-238|246-252|266-271|283-288|307-315
B: 665-676|682-691|696-702|709-715|725-730|743-748|762-767|784-792
Tilt angles:
A - Segment: 184-199 - Tilt: 62.0°
A - Segment: 204-214 - Tilt: 56.5°
A - Segment: 217-224 - Tilt: 44.1°
A - Segment: 231-238 - Tilt: 33.1°
A - Segment: 246-252 - Tilt: 20.7°
A - Segment: 266-271 - Tilt: 12.7°
A - Segment: 283-288 - Tilt: 8.7°
A - Segment: 307-315 - Tilt: 33.6°
B - Segment: 665-676 - Tilt: 62.9°
B - Segment: 682-691 - Tilt: 50.1°
B - Segment: 696-702 - Tilt: 40.0°
B - Segment: 709-715 - Tilt: 31.8°
B - Segment: 725-730 - Tilt: 15.3°
B - Segment: 743-748 - Tilt: 8.5°
B - Segment: 762-767 - Tilt: 20.1°
B - Segment: 784-792 - Tilt: 26.3°
Structural assessment:
MAIDEN score = 306.4222
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]