C14-rotor ring of the proton translocating chloroplast ATP synthase
Organism: Spinacia oleracea
Model: Experimental
Representation: Coarse-grained
Type: α-helical
Pfam Acc: PF00137
PDB ID: 2W5J
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 40.0 Å
Number of TM segments = 28
Sequence positions:
A: 9-34|49-76
C: 165-190|205-232
B: 87-112|127-154
E: 321-345|361-388
D: 243-268|283-310
G: 477-502|517-544
F: 399-424|439-466
I: 633-658|673-700
H: 555-580|595-622
K: 789-814|829-856
J: 711-736|751-778
M: 945-970|985-1012
L: 867-892|907-934
V: 1023-1048|1063-1090
Tilt angles:
A - Segment: 9-34 - Tilt: 4.9°
A - Segment: 49-76 - Tilt: 7.6°
C - Segment: 165-190 - Tilt: 4.6°
C - Segment: 205-232 - Tilt: 7.9°
B - Segment: 87-112 - Tilt: 4.8°
B - Segment: 127-154 - Tilt: 7.7°
E - Segment: 321-345 - Tilt: 7.2°
E - Segment: 361-388 - Tilt: 7.2°
D - Segment: 243-268 - Tilt: 4.5°
D - Segment: 283-310 - Tilt: 8.0°
G - Segment: 477-502 - Tilt: 2.4°
G - Segment: 517-544 - Tilt: 6.2°
F - Segment: 399-424 - Tilt: 3.1°
F - Segment: 439-466 - Tilt: 6.8°
I - Segment: 633-658 - Tilt: 2.0°
I - Segment: 673-700 - Tilt: 5.1°
H - Segment: 555-580 - Tilt: 2.2°
H - Segment: 595-622 - Tilt: 5.7°
K - Segment: 789-814 - Tilt: 3.4°
K - Segment: 829-856 - Tilt: 5.6°
J - Segment: 711-736 - Tilt: 2.3°
J - Segment: 751-778 - Tilt: 5.0°
M - Segment: 945-970 - Tilt: 4.4°
M - Segment: 985-1012 - Tilt: 6.6°
L - Segment: 867-892 - Tilt: 3.6°
L - Segment: 907-934 - Tilt: 5.7°
V - Segment: 1023-1048 - Tilt: 4.6°
V - Segment: 1063-1090 - Tilt: 7.0°
Structural assessment:
MAIDEN score = -180.7710
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]