Active yeast Ssh1 complex bound to the yeast 80S ribosome
Organism: Saccharomyces cerevisiae
Model: Experimental
Representation: Atomistic
Type: α-helical
Pfam Acc: PF00344
PDB ID: 2WW9
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 22.5 Å
Number of TM segments = 12
Sequence positions:
A: 33-46|79-100|117-131|157-172|175-194|250-265|292-310|367-382|429-445|447-461
C: 59-72
B: 47-67
Tilt angles:
A - Segment: 33-46 - Tilt: 20.2°
A - Segment: 79-100 - Tilt: 54.8°
A - Segment: 117-131 - Tilt: 5.5°
A - Segment: 157-172 - Tilt: 19.6°
A - Segment: 175-194 - Tilt: 43.1°
A - Segment: 250-265 - Tilt: 16.5°
A - Segment: 292-310 - Tilt: 27.2°
A - Segment: 367-382 - Tilt: 28.2°
A - Segment: 429-445 - Tilt: 29.7°
A - Segment: 447-461 - Tilt: 17.8°
C - Segment: 59-72 - Tilt: 27.2°
B - Segment: 47-67 - Tilt: 51.7°
Structural assessment:
MAIDEN score = -92.3531
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]