Active yeast Ssh1 complex bound to the yeast 80S ribosome
Organism: Saccharomyces cerevisiae
Model: Experimental
Representation: Coarse-grained
Type: α-helical
Pfam Acc: PF00344
PDB ID: 2WW9
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 22.5 Å
Number of TM segments = 12
Sequence positions:
A: 32-46|79-97|117-131|155-171|175-194|250-265|292-310|366-382|429-446|448-461
C: 552-565
B: 516-537
Tilt angles:
A - Segment: 32-46 - Tilt: 14.8°
A - Segment: 79-97 - Tilt: 52.0°
A - Segment: 117-131 - Tilt: 4.9°
A - Segment: 155-171 - Tilt: 33.8°
A - Segment: 175-194 - Tilt: 39.3°
A - Segment: 250-265 - Tilt: 16.7°
A - Segment: 292-310 - Tilt: 28.8°
A - Segment: 366-382 - Tilt: 22.2°
A - Segment: 429-446 - Tilt: 29.5°
A - Segment: 448-461 - Tilt: 19.5°
C - Segment: 552-565 - Tilt: 23.0°
B - Segment: 516-537 - Tilt: 47.5°
Structural assessment:
MAIDEN score = -74.7096
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]