Idle yeast Ssh1 complex bound to the yeast 80S ribosome
Organism: Saccharomyces cerevisiae
Model: Experimental
Representation: Coarse-grained
Type: α-helical
Pfam Acc: PF00344
PDB ID: 2WWA
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 24.9 Å
Number of TM segments = 10
Sequence positions:
A: 36-50|65-93|120-136|151-168|180-200|246-260|296-316|346-378
C: 555-570
B: 521-542
Tilt angles:
A - Segment: 36-50 - Tilt: 22.3°
A - Segment: 65-93 - Tilt: 39.7°
A - Segment: 120-136 - Tilt: 4.0°
A - Segment: 151-168 - Tilt: 29.6°
A - Segment: 180-200 - Tilt: 37.2°
A - Segment: 246-260 - Tilt: 22.6°
A - Segment: 296-316 - Tilt: 31.9°
A - Segment: 346-378 - Tilt: 13.0°
C - Segment: 555-570 - Tilt: 4.0°
B - Segment: 521-542 - Tilt: 41.9°
Structural assessment:
MAIDEN score = -55.6597
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]