Microscopic rotary mechanism of ion translocation in the fo complex of ATP synthases
Organism: Arthrospira platensis
Model: Experimental
Representation: Coarse-grained
Type: α-helical
Pfam Acc: PF00137
PDB ID: 2XQU
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 31.8 Å
Number of TM segments = 10
Sequence positions:
A: 5-29|54-80
C: 173-195|208-233
B: 89-114|131-155
E: 333-356|371-396
D: 253-276|289-314
Tilt angles:
A - Segment: 5-29 - Tilt: 37.4°
A - Segment: 54-80 - Tilt: 37.9°
C - Segment: 173-195 - Tilt: 32.1°
C - Segment: 208-233 - Tilt: 36.5°
B - Segment: 89-114 - Tilt: 35.8°
B - Segment: 131-155 - Tilt: 34.9°
E - Segment: 333-356 - Tilt: 28.0°
E - Segment: 371-396 - Tilt: 34.2°
D - Segment: 253-276 - Tilt: 27.0°
D - Segment: 289-314 - Tilt: 35.7°
Structural assessment:
MAIDEN score = -64.1898
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]