Proton dependent oligopeptide (POT) family transporter
Organism: Shewanella oneidensis
Model: Experimental
Representation: Atomistic
Type: α-helical
Pfam Acc: PF00854
PDB ID: 2XUT
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 30.0 Å
Number of TM segments = 13
Sequence positions:
A: 17-36|57-78|84-105|111-131|153-172|178-197|231-252|256-280|299-323|334-355|358-391|405-427|441-460
Tilt angles:
A - Segment: 17-36 - Tilt: 21.2°
A - Segment: 57-78 - Tilt: 32.4°
A - Segment: 84-105 - Tilt: 13.9°
A - Segment: 111-131 - Tilt: 22.1°
A - Segment: 153-172 - Tilt: 16.8°
A - Segment: 178-197 - Tilt: 14.4°
A - Segment: 231-252 - Tilt: 42.4°
A - Segment: 256-280 - Tilt: 29.5°
A - Segment: 299-323 - Tilt: 45.1°
A - Segment: 334-355 - Tilt: 36.8°
A - Segment: 358-391 - Tilt: 16.4°
A - Segment: 405-427 - Tilt: 39.8°
A - Segment: 441-460 - Tilt: 18.3°
Structural assessment:
MAIDEN score = -70.7794
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]