Proton dependent oligopeptide (POT) family transporter
Organism: Shewanella oneidensis
Model: Experimental
Representation: Coarse-grained
Type: α-helical
Pfam Acc: PF00854
PDB ID: 2XUT
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 22.0 Å
Number of TM segments = 13
Sequence positions:
A: 6-21|49-65|75-89|102-116|141-156|169-182|203-217|226-244|270-287|307-320|330-343|365-380|399-412
Tilt angles:
A - Segment: 6-21 - Tilt: 21.5°
A - Segment: 49-65 - Tilt: 36.4°
A - Segment: 75-89 - Tilt: 14.5°
A - Segment: 102-116 - Tilt: 23.6°
A - Segment: 141-156 - Tilt: 19.4°
A - Segment: 169-182 - Tilt: 14.1°
A - Segment: 203-217 - Tilt: 38.9°
A - Segment: 226-244 - Tilt: 39.9°
A - Segment: 270-287 - Tilt: 45.5°
A - Segment: 307-320 - Tilt: 27.3°
A - Segment: 330-343 - Tilt: 15.1°
A - Segment: 365-380 - Tilt: 29.6°
A - Segment: 399-412 - Tilt: 19.1°
Structural assessment:
MAIDEN score = -62.7777
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]