Lacy in complex with an affinity inactivator
Organism: Escherichia coli
Model: Experimental
Representation: Atomistic
Type: α-helical
Pfam Acc: PF01306
PDB ID: 2Y5Y
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 30.0 Å
Number of TM segments = 24
Sequence positions:
A: 10-34|42-62|76-99|103-126|143-162|166-186|226-248|258-279|290-309|312-330|353-373|378-398
B: 10-34|42-63|76-96|103-126|142-162|166-186|224-247|258-279|290-309|313-333|353-373|378-399
Tilt angles:
A - Segment: 10-34 - Tilt: 41.3°
A - Segment: 42-62 - Tilt: 23.7°
A - Segment: 76-99 - Tilt: 21.1°
A - Segment: 103-126 - Tilt: 38.2°
A - Segment: 143-162 - Tilt: 10.8°
A - Segment: 166-186 - Tilt: 29.4°
A - Segment: 226-248 - Tilt: 31.0°
A - Segment: 258-279 - Tilt: 24.9°
A - Segment: 290-309 - Tilt: 6.5°
A - Segment: 312-330 - Tilt: 15.6°
A - Segment: 353-373 - Tilt: 5.4°
A - Segment: 378-398 - Tilt: 26.8°
B - Segment: 10-34 - Tilt: 39.9°
B - Segment: 42-63 - Tilt: 23.6°
B - Segment: 76-96 - Tilt: 9.5°
B - Segment: 103-126 - Tilt: 37.4°
B - Segment: 142-162 - Tilt: 15.7°
B - Segment: 166-186 - Tilt: 27.9°
B - Segment: 224-247 - Tilt: 33.4°
B - Segment: 258-279 - Tilt: 25.5°
B - Segment: 290-309 - Tilt: 8.5°
B - Segment: 313-333 - Tilt: 24.9°
B - Segment: 353-373 - Tilt: 5.2°
B - Segment: 378-399 - Tilt: 21.4°
Structural assessment:
MAIDEN score = -245.6332
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]