Lacy in complex with an affinity inactivator
Organism: Escherichia coli
Model: Experimental
Representation: Coarse-grained
Type: α-helical
Pfam Acc: PF01306
PDB ID: 2Y5Y
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 26.7 Å
Number of TM segments = 24
Sequence positions:
A: 7-27|42-60|72-88|102-123|138-155|166-184|206-226|244-262|272-288|299-316|333-352|365-383
B: 396-417|425-443|460-479|486-506|527-544|549-566|602-621|634-652|667-684|689-705|730-748|754-773
Tilt angles:
A - Segment: 7-27 - Tilt: 39.7°
A - Segment: 42-60 - Tilt: 18.3°
A - Segment: 72-88 - Tilt: 9.8°
A - Segment: 102-123 - Tilt: 41.8°
A - Segment: 138-155 - Tilt: 13.1°
A - Segment: 166-184 - Tilt: 20.3°
A - Segment: 206-226 - Tilt: 34.4°
A - Segment: 244-262 - Tilt: 25.1°
A - Segment: 272-288 - Tilt: 6.1°
A - Segment: 299-316 - Tilt: 24.6°
A - Segment: 333-352 - Tilt: 13.0°
A - Segment: 365-383 - Tilt: 14.0°
B - Segment: 396-417 - Tilt: 33.5°
B - Segment: 425-443 - Tilt: 16.3°
B - Segment: 460-479 - Tilt: 14.2°
B - Segment: 486-506 - Tilt: 30.9°
B - Segment: 527-544 - Tilt: 12.0°
B - Segment: 549-566 - Tilt: 24.6°
B - Segment: 602-621 - Tilt: 31.8°
B - Segment: 634-652 - Tilt: 21.2°
B - Segment: 667-684 - Tilt: 3.5°
B - Segment: 689-705 - Tilt: 24.9°
B - Segment: 730-748 - Tilt: 12.5°
B - Segment: 754-773 - Tilt: 28.0°
Structural assessment:
MAIDEN score = -185.6864
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]