Gastric H⁺,K⁺-ATPase with bound rubidium
Organism: Sus scrofa
Model: Experimental
Representation: Atomistic
Type: α-helical
Pfam Acc: PF00122
PDB ID: 2YN9
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 27.0 Å
Number of TM segments = 11
Sequence positions:
A: 104-125|137-155|303-322|326-348|784-804|810-831|859-877|928-947|961-979|998-1015
B: 38-58
Tilt angles:
A - Segment: 104-125 - Tilt: 21.6°
A - Segment: 137-155 - Tilt: 19.2°
A - Segment: 303-322 - Tilt: 26.9°
A - Segment: 326-348 - Tilt: 51.1°
A - Segment: 784-804 - Tilt: 44.2°
A - Segment: 810-831 - Tilt: 30.7°
A - Segment: 859-877 - Tilt: 22.0°
A - Segment: 928-947 - Tilt: 25.0°
A - Segment: 961-979 - Tilt: 22.2°
A - Segment: 998-1015 - Tilt: 31.6°
B - Segment: 38-58 - Tilt: 37.2°
Structural assessment:
MAIDEN score = -113.3643
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]