Gastric H⁺,K⁺-ATPase with bound rubidium
Organism: Sus scrofa
Model: Experimental
Representation: Coarse-grained
Type: α-helical
Pfam Acc: PF00122
PDB ID: 2YN9
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 20.7 Å
Number of TM segments = 11
Sequence positions:
A: 67-83|101-115|264-282|288-312|743-761|773-794|818-832|895-908|911-931|963-977
B: 1002-1016
Tilt angles:
A - Segment: 67-83 - Tilt: 32.6°
A - Segment: 101-115 - Tilt: 37.0°
A - Segment: 264-282 - Tilt: 47.3°
A - Segment: 288-312 - Tilt: 58.8°
A - Segment: 743-761 - Tilt: 50.8°
A - Segment: 773-794 - Tilt: 52.4°
A - Segment: 818-832 - Tilt: 12.8°
A - Segment: 895-908 - Tilt: 31.8°
A - Segment: 911-931 - Tilt: 42.1°
A - Segment: 963-977 - Tilt: 20.9°
B - Segment: 1002-1016 - Tilt: 18.2°
Structural assessment:
MAIDEN score = -69.5820
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]