Wzi, an Outer Membrane Protein Involved in Group 1 Capsule Assembly in Escherichia coli, is a Carbohydrate Binding Beta-Barrel
Organism: Escherichia coli
Model: Experimental
Representation: Atomistic
Type: β-sheet
Pfam Acc: PF14052
PDB ID: 2YNK
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 24.3 Å
Number of TM segments = 15
Sequence positions:
A: 92-99|107-123|133-140|146-157|217-226|233-244|248-261|265-301|303-316|342-351|379-399|401-409|435-443|445-452|467-474
Tilt angles:
A - Segment: 92-99 - Tilt: 24.5°
A - Segment: 107-123 - Tilt: 45.8°
A - Segment: 133-140 - Tilt: 26.8°
A - Segment: 146-157 - Tilt: 12.6°
A - Segment: 217-226 - Tilt: 44.3°
A - Segment: 233-244 - Tilt: 55.9°
A - Segment: 248-261 - Tilt: 60.5°
A - Segment: 265-301 - Tilt: 65.6°
A - Segment: 303-316 - Tilt: 46.5°
A - Segment: 342-351 - Tilt: 45.3°
A - Segment: 379-399 - Tilt: 53.7°
A - Segment: 401-409 - Tilt: 28.6°
A - Segment: 435-443 - Tilt: 40.7°
A - Segment: 445-452 - Tilt: 21.8°
A - Segment: 467-474 - Tilt: 24.5°
Structural assessment:
MAIDEN score = 41.3517
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]