Wzi, an Outer Membrane Protein Involved in Group 1 Capsule Assembly in Escherichia coli, is a Carbohydrate Binding Beta-Barrel
Organism: Escherichia coli
Model: Experimental
Representation: Coarse-grained
Type: β-sheet
Pfam Acc: PF14052
PDB ID: 2YNK
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 20.1 Å
Number of TM segments = 16
Sequence positions:
A: 64-76|94-103|106-115|171-176|194-199|214-220|227-233|255-261|274-280|291-297|310-316|353-359|369-376|395-404|410-419|429-440
Tilt angles:
A - Segment: 64-76 - Tilt: 40.6°
A - Segment: 94-103 - Tilt: 49.3°
A - Segment: 106-115 - Tilt: 51.1°
A - Segment: 171-176 - Tilt: 22.9°
A - Segment: 194-199 - Tilt: 28.4°
A - Segment: 214-220 - Tilt: 23.8°
A - Segment: 227-233 - Tilt: 21.5°
A - Segment: 255-261 - Tilt: 21.9°
A - Segment: 274-280 - Tilt: 25.8°
A - Segment: 291-297 - Tilt: 33.6°
A - Segment: 310-316 - Tilt: 30.3°
A - Segment: 353-359 - Tilt: 32.6°
A - Segment: 369-376 - Tilt: 34.9°
A - Segment: 395-404 - Tilt: 48.6°
A - Segment: 410-419 - Tilt: 52.8°
A - Segment: 429-440 - Tilt: 59.8°
Structural assessment:
MAIDEN score = 451.8691
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]