Bacterial Cyclic-Nucleotide Regulated Ion Channel
Organism: Rhizobium loti
Model: Experimental
Representation: Atomistic
Type: α-helical
Pfam Acc: PF00520
PDB ID: 2ZD9
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 28.8 Å
Number of TM segments = 24
Sequence positions:
A: 12-29|37-57|76-93|96-110|129-150|186-207
C: 12-29|38-57|76-93|96-110|129-150|186-207
B: 12-29|39-57|76-93|96-110|129-150|186-207
D: 12-29|39-57|76-93|96-110|129-150|186-207
Tilt angles:
A - Segment: 12-29 - Tilt: 15.9°
A - Segment: 37-57 - Tilt: 27.4°
A - Segment: 76-93 - Tilt: 14.5°
A - Segment: 96-110 - Tilt: 14.9°
A - Segment: 129-150 - Tilt: 34.8°
A - Segment: 186-207 - Tilt: 38.0°
C - Segment: 12-29 - Tilt: 16.7°
C - Segment: 38-57 - Tilt: 22.0°
C - Segment: 76-93 - Tilt: 14.7°
C - Segment: 96-110 - Tilt: 16.2°
C - Segment: 129-150 - Tilt: 35.2°
C - Segment: 186-207 - Tilt: 38.2°
B - Segment: 12-29 - Tilt: 17.2°
B - Segment: 39-57 - Tilt: 18.0°
B - Segment: 76-93 - Tilt: 11.0°
B - Segment: 96-110 - Tilt: 14.1°
B - Segment: 129-150 - Tilt: 35.5°
B - Segment: 186-207 - Tilt: 38.4°
D - Segment: 12-29 - Tilt: 16.7°
D - Segment: 39-57 - Tilt: 19.8°
D - Segment: 76-93 - Tilt: 12.1°
D - Segment: 96-110 - Tilt: 14.8°
D - Segment: 129-150 - Tilt: 35.6°
D - Segment: 186-207 - Tilt: 38.5°
Structural assessment:
MAIDEN score = -194.2987
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]