Home Search Browse Deposit Download Help Contact
Sodium - potassium pump in the E2.2K⁺.Pi state

Organism: Squalus acanthias
Model: Experimental
Representation: Coarse-grained
Type: α-helical

Pfam Acc: PF00122
PDB ID: 2ZXE


Membrane assignment:

Output PDB file Download

Hydrophobic thickness = 24.3 Å

Number of TM segments = 12

Sequence positions:
A: 65-83|98-115|264-282|288-308|744-764|770-790|819-837|888-906|920-937|957-972
B: 1002-1019
G: 1280-1294

Tilt angles:
A - Segment: 65-83 - Tilt: 23.6°
A - Segment: 98-115 - Tilt: 27.7°
A - Segment: 264-282 - Tilt: 36.3°
A - Segment: 288-308 - Tilt: 46.6°
A - Segment: 744-764 - Tilt: 47.0°
A - Segment: 770-790 - Tilt: 38.7°
A - Segment: 819-837 - Tilt: 18.5°
A - Segment: 888-906 - Tilt: 20.3°
A - Segment: 920-937 - Tilt: 27.7°
A - Segment: 957-972 - Tilt: 22.8°
B - Segment: 1002-1019 - Tilt: 33.4°
G - Segment: 1280-1294 - Tilt: 21.2°


Structural assessment:

MAIDEN score = -77.6688
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.


Scores for all residue pairs Download




[creation date: Sep-08-2016]