Outer membrane protein PorB from Neisseria meningitidis in complex with sucrose
Organism: Neisseria meningitidis
Model: Experimental
Representation: Coarse-grained
Type: β-sheet
Pfam Acc: PF00267
PDB ID: 3A2S
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 20.0 Å
Number of TM segments = 12
Sequence positions:
X: 5-15|34-45|147-153|170-175|187-193|216-223|235-241|256-263|274-282|295-302|312-320|330-339
Tilt angles:
X - Segment: 5-15 - Tilt: 55.0°
X - Segment: 34-45 - Tilt: 60.6°
X - Segment: 147-153 - Tilt: 25.5°
X - Segment: 170-175 - Tilt: 24.5°
X - Segment: 187-193 - Tilt: 28.8°
X - Segment: 216-223 - Tilt: 34.3°
X - Segment: 235-241 - Tilt: 36.8°
X - Segment: 256-263 - Tilt: 38.1°
X - Segment: 274-282 - Tilt: 45.9°
X - Segment: 295-302 - Tilt: 47.6°
X - Segment: 312-320 - Tilt: 47.9°
X - Segment: 330-339 - Tilt: 50.9°
Structural assessment:
MAIDEN score = 282.7968
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]