Proton pumping rhodopsin AR2 from marine alga Acetabularia acetabulum
Organism: Acetabularia acetabulum
Model: Experimental
Representation: Atomistic
Type: α-helical
Pfam Acc: PF01036
PDB ID: 3AM6
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 36.6 Å
Number of TM segments = 7
Sequence positions:
A: 11-34|39-61|75-97|99-124|129-153|164-190|199-224
Tilt angles:
A - Segment: 11-34 - Tilt: 8.7°
A - Segment: 39-61 - Tilt: 6.3°
A - Segment: 75-97 - Tilt: 14.9°
A - Segment: 99-124 - Tilt: 12.5°
A - Segment: 129-153 - Tilt: 26.2°
A - Segment: 164-190 - Tilt: 16.3°
A - Segment: 199-224 - Tilt: 17.9°
Structural assessment:
MAIDEN score = -101.0433
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]