Plasma Membrane Proton Pump
Organism: Arabidopsis thaliana
Model: Experimental
Representation: Atomistic
Type: α-helical
Pfam Acc: PF00122
PDB ID: 3B8C
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 25.0 Å
Number of TM segments = 10
Sequence positions:
B: 68-83|93-108|247-262|273-287|648-665|670-687|709-725|752-768|788-803|819-837
Tilt angles:
B - Segment: 68-83 - Tilt: 3.6°
B - Segment: 93-108 - Tilt: 16.4°
B - Segment: 247-262 - Tilt: 17.9°
B - Segment: 273-287 - Tilt: 26.1°
B - Segment: 648-665 - Tilt: 27.4°
B - Segment: 670-687 - Tilt: 27.5°
B - Segment: 709-725 - Tilt: 16.7°
B - Segment: 752-768 - Tilt: 25.0°
B - Segment: 788-803 - Tilt: 12.3°
B - Segment: 819-837 - Tilt: 36.7°
Structural assessment:
MAIDEN score = -69.9553
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]