Plasma Membrane Proton Pump
Organism: Arabidopsis thaliana
Model: Experimental
Representation: Coarse-grained
Type: α-helical
Pfam Acc: PF00122
PDB ID: 3B8C
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 25.0 Å
Number of TM segments = 10
Sequence positions:
B: 891-906|914-929|1069-1086|1094-1109|1470-1488|1491-1508|1531-1547|1573-1589|1610-1630|1638-1659
Tilt angles:
B - Segment: 891-906 - Tilt: 8.3°
B - Segment: 914-929 - Tilt: 8.2°
B - Segment: 1069-1086 - Tilt: 27.3°
B - Segment: 1094-1109 - Tilt: 22.1°
B - Segment: 1470-1488 - Tilt: 22.0°
B - Segment: 1491-1508 - Tilt: 35.9°
B - Segment: 1531-1547 - Tilt: 15.8°
B - Segment: 1573-1589 - Tilt: 23.3°
B - Segment: 1610-1630 - Tilt: 36.4°
B - Segment: 1638-1659 - Tilt: 43.3°
Structural assessment:
MAIDEN score = -68.6150
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]