Ribosome-SecY complex
Organism: Methanococcus jannaschii
Model: Experimental
Representation: Atomistic
Type: α-helical
Pfam Acc: PF00344
PDB ID: 3BO0
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 29.4 Å
Number of TM segments = 10
Sequence positions:
A: 31-47|55-94|110-129|138-158|168-197|209-226|262-283|320-340
C: 32-51
B: 37-63
Tilt angles:
A - Segment: 31-47 - Tilt: 29.2°
A - Segment: 55-94 - Tilt: 44.3°
A - Segment: 110-129 - Tilt: 15.2°
A - Segment: 138-158 - Tilt: 31.3°
A - Segment: 168-197 - Tilt: 43.2°
A - Segment: 209-226 - Tilt: 25.6°
A - Segment: 262-283 - Tilt: 34.9°
A - Segment: 320-340 - Tilt: 35.2°
C - Segment: 32-51 - Tilt: 15.5°
B - Segment: 37-63 - Tilt: 45.6°
Structural assessment:
MAIDEN score = -72.2556
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]