Ribosome-SecY complex
Organism: Methanococcus jannaschii
Model: Experimental
Representation: Coarse-grained
Type: α-helical
Pfam Acc: PF00344
PDB ID: 3BO0
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 20.0 Å
Number of TM segments = 12
Sequence positions:
A: 133-145|177-198|213-226|249-263|272-287|320-331|363-379|431-445|492-506|513-526
C: 623-635
B: 579-601
Tilt angles:
A - Segment: 133-145 - Tilt: 9.6°
A - Segment: 177-198 - Tilt: 54.0°
A - Segment: 213-226 - Tilt: 9.9°
A - Segment: 249-263 - Tilt: 27.0°
A - Segment: 272-287 - Tilt: 39.6°
A - Segment: 320-331 - Tilt: 16.7°
A - Segment: 363-379 - Tilt: 44.2°
A - Segment: 431-445 - Tilt: 29.5°
A - Segment: 492-506 - Tilt: 20.5°
A - Segment: 513-526 - Tilt: 9.1°
C - Segment: 623-635 - Tilt: 11.0°
B - Segment: 579-601 - Tilt: 57.4°
Structural assessment:
MAIDEN score = -61.9155
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]