Transmembrane domain of M2 protein and Amantadine complex
Organism: Influenza virus
Model: Experimental
Representation: Atomistic
Type: α-helical
Pfam Acc: PF00599
PDB ID: 3C9J
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 24.3 Å
Number of TM segments = 4
Sequence positions:
A: 5-22
C: 5-23
B: 5-22
D: 5-23
Tilt angles:
A - Segment: 5-22 - Tilt: 45.8°
C - Segment: 5-23 - Tilt: 34.9°
B - Segment: 5-22 - Tilt: 40.0°
D - Segment: 5-23 - Tilt: 39.2°
Structural assessment:
MAIDEN score = -55.9987
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]