Methylosinus trichosporium OB3b particulate methane monooxygenase (PMMO)
Organism: Methylosinus trichosporium
Model: Experimental
Representation: Atomistic
Type: α-helical
Pfam Acc: PF02461
PDB ID: 3CHX
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 25.2 Å
Number of TM segments = 38
Sequence positions:
A: 199-214|240-256
C: 22-38|66-82|109-126|148-165
B: 28-49|69-85|90-108|203-218|226-244
E: 199-213|240-256
G: 24-40|65-81|110-127|147-164
F: 31-49|69-85|90-108|203-217|226-244
I: 196-213|241-257
K: 24-40|65-81|110-127|148-164
J: 31-50|68-85|91-108|126-143|145-161|203-217|226-244
M: 5-23
O: 4-22
N: 4-22
Tilt angles:
A - Segment: 199-214 - Tilt: 7.5°
A - Segment: 240-256 - Tilt: 15.8°
C - Segment: 22-38 - Tilt: 16.4°
C - Segment: 66-82 - Tilt: 9.2°
C - Segment: 109-126 - Tilt: 20.1°
C - Segment: 148-165 - Tilt: 12.2°
B - Segment: 28-49 - Tilt: 42.0°
B - Segment: 69-85 - Tilt: 11.6°
B - Segment: 90-108 - Tilt: 31.8°
B - Segment: 203-218 - Tilt: 6.2°
B - Segment: 226-244 - Tilt: 43.1°
E - Segment: 199-213 - Tilt: 4.1°
E - Segment: 240-256 - Tilt: 15.6°
G - Segment: 24-40 - Tilt: 9.4°
G - Segment: 65-81 - Tilt: 20.6°
G - Segment: 110-127 - Tilt: 16.0°
G - Segment: 147-164 - Tilt: 11.4°
F - Segment: 31-49 - Tilt: 36.9°
F - Segment: 69-85 - Tilt: 11.7°
F - Segment: 90-108 - Tilt: 35.9°
F - Segment: 203-217 - Tilt: 2.3°
F - Segment: 226-244 - Tilt: 39.4°
I - Segment: 196-213 - Tilt: 15.0°
I - Segment: 241-257 - Tilt: 12.0°
K - Segment: 24-40 - Tilt: 8.8°
K - Segment: 65-81 - Tilt: 22.7°
K - Segment: 110-127 - Tilt: 17.7°
K - Segment: 148-164 - Tilt: 9.6°
J - Segment: 31-50 - Tilt: 29.0°
J - Segment: 68-85 - Tilt: 13.7°
J - Segment: 91-108 - Tilt: 41.2°
J - Segment: 126-143 - Tilt: 38.0°
J - Segment: 145-161 - Tilt: 21.8°
J - Segment: 203-217 - Tilt: 4.2°
J - Segment: 226-244 - Tilt: 42.7°
M - Segment: 5-23 - Tilt: 8.8°
O - Segment: 4-22 - Tilt: 16.0°
N - Segment: 4-22 - Tilt: 19.6°
Structural assessment:
MAIDEN score = -117.0819
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]