Spinach Aquaporin SoPIP2
Organism: Spinacia oleracea
Model: Experimental
Representation: Atomistic
Type: α-helical
Pfam Acc: PF00230
PDB ID: 3CLL
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 28.8 Å
Number of TM segments = 6
Sequence positions:
A: 38-59|74-93|116-140|161-182|197-214|239-260
Tilt angles:
A - Segment: 38-59 - Tilt: 30.4°
A - Segment: 74-93 - Tilt: 18.3°
A - Segment: 116-140 - Tilt: 43.1°
A - Segment: 161-182 - Tilt: 31.1°
A - Segment: 197-214 - Tilt: 9.3°
A - Segment: 239-260 - Tilt: 37.6°
Structural assessment:
MAIDEN score = -62.6693
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]