Complex III with bound cytochrome c in reduced state and definition of a minimal core interface for electron transfer
Organism: Saccharomyces cerevisiae
Model: Experimental
Representation: Atomistic
Type: α-helical
Pfam Acc: PF00033
PDB ID: 3CX5
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 28.0 Å
Number of TM segments = 24
Sequence positions:
C: 27-48|84-106|110-128|182-201|225-243|289-309|320-338|350-370
E: 54-76
D: 272-289
I: 15-32
H: 48-72
O: 272-290
N: 27-48|84-106|111-128|182-201|225-242|289-309|320-338|350-370
P: 54-76
S: 44-72
T: 14-32
Tilt angles:
C - Segment: 27-48 - Tilt: 41.7°
C - Segment: 84-106 - Tilt: 33.2°
C - Segment: 110-128 - Tilt: 11.3°
C - Segment: 182-201 - Tilt: 19.7°
C - Segment: 225-243 - Tilt: 14.3°
C - Segment: 289-309 - Tilt: 25.3°
C - Segment: 320-338 - Tilt: 12.8°
C - Segment: 350-370 - Tilt: 8.8°
E - Segment: 54-76 - Tilt: 38.3°
D - Segment: 272-289 - Tilt: 14.5°
I - Segment: 15-32 - Tilt: 12.0°
H - Segment: 48-72 - Tilt: 46.1°
O - Segment: 272-290 - Tilt: 6.8°
N - Segment: 27-48 - Tilt: 42.2°
N - Segment: 84-106 - Tilt: 32.0°
N - Segment: 111-128 - Tilt: 17.5°
N - Segment: 182-201 - Tilt: 20.9°
N - Segment: 225-242 - Tilt: 16.8°
N - Segment: 289-309 - Tilt: 26.9°
N - Segment: 320-338 - Tilt: 13.1°
N - Segment: 350-370 - Tilt: 9.7°
P - Segment: 54-76 - Tilt: 39.6°
S - Segment: 44-72 - Tilt: 49.7°
T - Segment: 14-32 - Tilt: 14.2°
Structural assessment:
MAIDEN score = -276.5128
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]