Complex III with bound cytochrome c in reduced state and definition of a minimal core interface for electron transfer
Organism: Saccharomyces cerevisiae
Model: Experimental
Representation: Coarse-grained
Type: α-helical
Pfam Acc: PF00033
PDB ID: 3CX5
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 28.0 Å
Number of TM segments = 24
Sequence positions:
C: 810-829|867-890|893-911|966-984|1006-1025|1072-1092|1103-1120|1133-1153
E: 1439-1461
D: 1379-1396
I: 1907-1925
H: 1836-1871
O: 3564-3581
N: 2994-3014|3052-3075|3078-3096|3152-3169|3191-3210|3258-3277|3287-3305|3318-3338
P: 3624-3646
S: 4021-4055
T: 4092-4110
Tilt angles:
C - Segment: 810-829 - Tilt: 35.1°
C - Segment: 867-890 - Tilt: 30.0°
C - Segment: 893-911 - Tilt: 10.6°
C - Segment: 966-984 - Tilt: 13.0°
C - Segment: 1006-1025 - Tilt: 20.1°
C - Segment: 1072-1092 - Tilt: 23.6°
C - Segment: 1103-1120 - Tilt: 18.3°
C - Segment: 1133-1153 - Tilt: 9.0°
E - Segment: 1439-1461 - Tilt: 38.4°
D - Segment: 1379-1396 - Tilt: 11.2°
I - Segment: 1907-1925 - Tilt: 13.2°
H - Segment: 1836-1871 - Tilt: 56.5°
O - Segment: 3564-3581 - Tilt: 12.6°
N - Segment: 2994-3014 - Tilt: 31.3°
N - Segment: 3052-3075 - Tilt: 31.0°
N - Segment: 3078-3096 - Tilt: 11.9°
N - Segment: 3152-3169 - Tilt: 19.3°
N - Segment: 3191-3210 - Tilt: 19.0°
N - Segment: 3258-3277 - Tilt: 21.7°
N - Segment: 3287-3305 - Tilt: 12.8°
N - Segment: 3318-3338 - Tilt: 7.6°
P - Segment: 3624-3646 - Tilt: 38.8°
S - Segment: 4021-4055 - Tilt: 56.9°
T - Segment: 4092-4110 - Tilt: 12.0°
Structural assessment:
MAIDEN score = -199.3159
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]