Yeast complex III with isoform-2 cytochrome c bound and definition of a minimal core interface for electron transfer
Organism: Saccharomyces cerevisiae
Model: Experimental
Representation: Atomistic
Type: α-helical
Pfam Acc: PF00033
PDB ID: 3CXH
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 28.0 Å
Number of TM segments = 24
Sequence positions:
C: 27-46|85-107|110-128|184-201|225-242|290-309|320-338|350-370
E: 54-76
D: 272-290
I: 14-32
H: 44-72
O: 272-290
N: 26-46|85-107|110-128|184-201|223-242|290-309|320-337|350-370
P: 54-76
S: 36-70
T: 14-32
Tilt angles:
C - Segment: 27-46 - Tilt: 35.8°
C - Segment: 85-107 - Tilt: 35.0°
C - Segment: 110-128 - Tilt: 10.7°
C - Segment: 184-201 - Tilt: 19.1°
C - Segment: 225-242 - Tilt: 17.6°
C - Segment: 290-309 - Tilt: 25.2°
C - Segment: 320-338 - Tilt: 12.8°
C - Segment: 350-370 - Tilt: 9.4°
E - Segment: 54-76 - Tilt: 38.6°
D - Segment: 272-290 - Tilt: 5.9°
I - Segment: 14-32 - Tilt: 14.2°
H - Segment: 44-72 - Tilt: 48.8°
O - Segment: 272-290 - Tilt: 6.7°
N - Segment: 26-46 - Tilt: 30.3°
N - Segment: 85-107 - Tilt: 34.9°
N - Segment: 110-128 - Tilt: 10.6°
N - Segment: 184-201 - Tilt: 19.6°
N - Segment: 223-242 - Tilt: 21.1°
N - Segment: 290-309 - Tilt: 25.7°
N - Segment: 320-337 - Tilt: 21.0°
N - Segment: 350-370 - Tilt: 9.0°
P - Segment: 54-76 - Tilt: 38.9°
S - Segment: 36-70 - Tilt: 57.7°
T - Segment: 14-32 - Tilt: 13.6°
Structural assessment:
MAIDEN score = -259.2013
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]