ModBC from Methanosarcina acetivorans
Organism: Methanosarcina acetivorans
Model: Experimental
Representation: Atomistic
Type: α-helical
Pfam Acc: PF00528
PDB ID: 3D31
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 24.3 Å
Number of TM segments = 11
Sequence positions:
C: 16-42|58-79|96-120|139-156|200-215|244-259
D: 20-39|64-82|96-116|143-159|197-215
Tilt angles:
C - Segment: 16-42 - Tilt: 50.0°
C - Segment: 58-79 - Tilt: 46.7°
C - Segment: 96-120 - Tilt: 40.1°
C - Segment: 139-156 - Tilt: 26.5°
C - Segment: 200-215 - Tilt: 12.8°
C - Segment: 244-259 - Tilt: 8.7°
D - Segment: 20-39 - Tilt: 26.8°
D - Segment: 64-82 - Tilt: 36.9°
D - Segment: 96-116 - Tilt: 14.7°
D - Segment: 143-159 - Tilt: 9.4°
D - Segment: 197-215 - Tilt: 31.3°
Structural assessment:
MAIDEN score = -101.7763
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]