ModBC from Methanosarcina acetivorans
Organism: Methanosarcina acetivorans
Model: Experimental
Representation: Coarse-grained
Type: α-helical
Pfam Acc: PF00528
PDB ID: 3D31
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 26.0 Å
Number of TM segments = 11
Sequence positions:
C: 704-725|745-766|780-804|825-843|880-899
D: 948-974|989-1011|1028-1053|1071-1088|1132-1148|1174-1191
Tilt angles:
C - Segment: 704-725 - Tilt: 36.8°
C - Segment: 745-766 - Tilt: 37.8°
C - Segment: 780-804 - Tilt: 16.5°
C - Segment: 825-843 - Tilt: 9.9°
C - Segment: 880-899 - Tilt: 27.6°
D - Segment: 948-974 - Tilt: 49.5°
D - Segment: 989-1011 - Tilt: 41.4°
D - Segment: 1028-1053 - Tilt: 33.1°
D - Segment: 1071-1088 - Tilt: 25.5°
D - Segment: 1132-1148 - Tilt: 11.5°
D - Segment: 1174-1191 - Tilt: 16.8°
Structural assessment:
MAIDEN score = -116.5504
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]