Human Aquaporin 5 (AQP5) - High Resolution X-ray Structure
Organism: Homo sapiens
Model: Experimental
Representation: Atomistic
Type: α-helical
Pfam Acc: PF00230
PDB ID: 3D9S
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 30.0 Å
Number of TM segments = 24
Sequence positions:
A: 11-32|42-79|84-108|128-150|158-177|202-222
C: 11-32|42-79|84-108|128-150|158-177|202-222
B: 10-32|42-79|84-108|128-150|158-177|202-225
D: 11-32|42-79|84-108|129-150|158-177|202-225
Tilt angles:
A - Segment: 11-32 - Tilt: 28.9°
A - Segment: 42-79 - Tilt: 34.1°
A - Segment: 84-108 - Tilt: 42.9°
A - Segment: 128-150 - Tilt: 30.7°
A - Segment: 158-177 - Tilt: 21.3°
A - Segment: 202-222 - Tilt: 22.0°
C - Segment: 11-32 - Tilt: 29.8°
C - Segment: 42-79 - Tilt: 33.8°
C - Segment: 84-108 - Tilt: 41.4°
C - Segment: 128-150 - Tilt: 31.8°
C - Segment: 158-177 - Tilt: 21.3°
C - Segment: 202-222 - Tilt: 20.1°
B - Segment: 10-32 - Tilt: 26.4°
B - Segment: 42-79 - Tilt: 35.3°
B - Segment: 84-108 - Tilt: 42.8°
B - Segment: 128-150 - Tilt: 29.9°
B - Segment: 158-177 - Tilt: 19.2°
B - Segment: 202-225 - Tilt: 29.3°
D - Segment: 11-32 - Tilt: 30.3°
D - Segment: 42-79 - Tilt: 35.4°
D - Segment: 84-108 - Tilt: 43.8°
D - Segment: 129-150 - Tilt: 34.1°
D - Segment: 158-177 - Tilt: 19.8°
D - Segment: 202-225 - Tilt: 30.8°
Structural assessment:
MAIDEN score = -248.1892
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]