Xanthorhodopsin, a Light-Driven Ion Pump with Dual Chromophore
Organism: Salinibacter ruber
Model: Experimental
Representation: Coarse-grained
Type: α-helical
Pfam Acc: PF01036
PDB ID: 3DDL
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 33.0 Å
Number of TM segments = 7
Sequence positions:
A: 8-34|44-67|86-105|119-140|142-166|189-209|214-237
Tilt angles:
A - Segment: 8-34 - Tilt: 35.7°
A - Segment: 44-67 - Tilt: 23.9°
A - Segment: 86-105 - Tilt: 7.8°
A - Segment: 119-140 - Tilt: 19.8°
A - Segment: 142-166 - Tilt: 10.0°
A - Segment: 189-209 - Tilt: 19.5°
A - Segment: 214-237 - Tilt: 25.7°
Structural assessment:
MAIDEN score = -51.8844
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]