Human microsomal prostaglandin E synthase 1
Organism: Homo sapiens
Model: Experimental
Representation: Coarse-grained
Type: α-helical
Pfam Acc: PF01124
PDB ID: 3DWW
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 33.0 Å
Number of TM segments = 12
Sequence positions:
A: 5-29|57-79|87-109|114-135
C: 289-313|341-363|371-393|398-419
B: 147-172|199-221|229-251|256-277
Tilt angles:
A - Segment: 5-29 - Tilt: 32.4°
A - Segment: 57-79 - Tilt: 23.3°
A - Segment: 87-109 - Tilt: 15.0°
A - Segment: 114-135 - Tilt: 25.6°
C - Segment: 289-313 - Tilt: 32.2°
C - Segment: 341-363 - Tilt: 24.0°
C - Segment: 371-393 - Tilt: 14.7°
C - Segment: 398-419 - Tilt: 25.1°
B - Segment: 147-172 - Tilt: 33.1°
B - Segment: 199-221 - Tilt: 25.3°
B - Segment: 229-251 - Tilt: 17.7°
B - Segment: 256-277 - Tilt: 26.6°
Structural assessment:
MAIDEN score = -129.2802
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]