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Charge-transfer intermediate of the transmembrane redox catalyst DsbB

Organism: Escherichia coli
Model: Experimental
Representation: Atomistic
Type: α-helical

Pfam Acc: PF02600
PDB ID: 3E9J


Membrane assignment:

Output PDB file Download

Hydrophobic thickness = 20.0 Å

Number of TM segments = 5

Sequence positions:
C: 40-67|76-95|97-109
B: 56-66|124-143

Tilt angles:
C - Segment: 40-67 - Tilt: 66.7°
C - Segment: 76-95 - Tilt: 50.6°
C - Segment: 97-109 - Tilt: 48.1°
B - Segment: 56-66 - Tilt: 48.7°
B - Segment: 124-143 - Tilt: 52.8°


Structural assessment:

MAIDEN score = -8.0963
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.


Scores for all residue pairs Download




[creation date: Sep-08-2016]