NhaA dimer model
Organism: Escherichia coli
Model: Experimental
Representation: Atomistic
Type: α-helical
Pfam Acc: PF06965
PDB ID: 3FI1
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 24.0 Å
Number of TM segments = 11
Sequence positions:
A: 14-31|60-77|98-115|123-137|159-175|183-198|206-220|222-237|291-310|332-349|360-376
Tilt angles:
A - Segment: 14-31 - Tilt: 28.3°
A - Segment: 60-77 - Tilt: 31.5°
A - Segment: 98-115 - Tilt: 34.4°
A - Segment: 123-137 - Tilt: 28.3°
A - Segment: 159-175 - Tilt: 25.4°
A - Segment: 183-198 - Tilt: 9.6°
A - Segment: 206-220 - Tilt: 28.2°
A - Segment: 222-237 - Tilt: 20.4°
A - Segment: 291-310 - Tilt: 29.9°
A - Segment: 332-349 - Tilt: 29.0°
A - Segment: 360-376 - Tilt: 17.7°
Structural assessment:
MAIDEN score = -67.0753
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]