NhaA dimer model
Organism: Escherichia coli
Model: Experimental
Representation: Coarse-grained
Type: α-helical
Pfam Acc: PF06965
PDB ID: 3FI1
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 25.5 Å
Number of TM segments = 12
Sequence positions:
A: 7-31|51-72|89-107|115-129|149-166|175-194|196-212|214-230|250-269|272-305|324-341|350-368
Tilt angles:
A - Segment: 7-31 - Tilt: 19.6°
A - Segment: 51-72 - Tilt: 42.2°
A - Segment: 89-107 - Tilt: 33.6°
A - Segment: 115-129 - Tilt: 18.3°
A - Segment: 149-166 - Tilt: 16.2°
A - Segment: 175-194 - Tilt: 16.3°
A - Segment: 196-212 - Tilt: 29.8°
A - Segment: 214-230 - Tilt: 25.4°
A - Segment: 250-269 - Tilt: 50.0°
A - Segment: 272-305 - Tilt: 59.5°
A - Segment: 324-341 - Tilt: 27.9°
A - Segment: 350-368 - Tilt: 23.6°
Structural assessment:
MAIDEN score = -66.4526
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]