ApcT Transporter
Organism: Methanococcus jannaschii
Model: Experimental
Representation: Atomistic
Type: α-helical
Pfam Acc: PF00324
PDB ID: 3GIA
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 28.2 Å
Number of TM segments = 10
Sequence positions:
A: 11-30|40-57|87-108|187-210|224-242|275-301|314-338|340-359|375-395|399-422
Tilt angles:
A - Segment: 11-30 - Tilt: 27.8°
A - Segment: 40-57 - Tilt: 12.7°
A - Segment: 87-108 - Tilt: 41.8°
A - Segment: 187-210 - Tilt: 46.5°
A - Segment: 224-242 - Tilt: 20.7°
A - Segment: 275-301 - Tilt: 47.6°
A - Segment: 314-338 - Tilt: 33.8°
A - Segment: 340-359 - Tilt: 26.0°
A - Segment: 375-395 - Tilt: 34.1°
A - Segment: 399-422 - Tilt: 38.8°
Structural assessment:
MAIDEN score = -138.5300
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]