Carnitine transporter
Organism: Escherichia coli
Model: Experimental
Representation: Coarse-grained
Type: α-helical
Pfam Acc: PF02028
PDB ID: 3HFX
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 28.8 Å
Number of TM segments = 12
Sequence positions:
A: 3-21|24-56|78-100|122-140|180-205|219-238|240-264|300-321|337-356|395-420|435-455|457-477
Tilt angles:
A - Segment: 3-21 - Tilt: 11.9°
A - Segment: 24-56 - Tilt: 52.8°
A - Segment: 78-100 - Tilt: 33.0°
A - Segment: 122-140 - Tilt: 14.4°
A - Segment: 180-205 - Tilt: 43.3°
A - Segment: 219-238 - Tilt: 25.6°
A - Segment: 240-264 - Tilt: 48.4°
A - Segment: 300-321 - Tilt: 29.4°
A - Segment: 337-356 - Tilt: 14.8°
A - Segment: 395-420 - Tilt: 43.2°
A - Segment: 435-455 - Tilt: 30.0°
A - Segment: 457-477 - Tilt: 27.3°
Structural assessment:
MAIDEN score = -147.6134
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]