An arginine agmatine antiporter (ADIC) in complex with a Fab fragment
Organism: Salmonella enterica
Model: Experimental
Representation: Coarse-grained
Type: α-helical
Pfam Acc: PF00324
PDB ID: 3HQK
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 21.3 Å
Number of TM segments = 22
Sequence positions:
C: 842-855|873-886|916-937|954-967|974-991|1018-1031|1048-1063|1101-1118|1144-1157|1169-1184|1206-1222|1226-1240
D: 1261-1274|1295-1309|1337-1354|1442-1455|1468-1481|1526-1542|1563-1576|1591-1607|1627-1643|1647-1661
Tilt angles:
C - Segment: 842-855 - Tilt: 18.1°
C - Segment: 873-886 - Tilt: 13.3°
C - Segment: 916-937 - Tilt: 52.5°
C - Segment: 954-967 - Tilt: 23.7°
C - Segment: 974-991 - Tilt: 43.8°
C - Segment: 1018-1031 - Tilt: 34.7°
C - Segment: 1048-1063 - Tilt: 16.0°
C - Segment: 1101-1118 - Tilt: 48.0°
C - Segment: 1144-1157 - Tilt: 21.6°
C - Segment: 1169-1184 - Tilt: 36.5°
C - Segment: 1206-1222 - Tilt: 42.2°
C - Segment: 1226-1240 - Tilt: 33.6°
D - Segment: 1261-1274 - Tilt: 27.8°
D - Segment: 1295-1309 - Tilt: 22.3°
D - Segment: 1337-1354 - Tilt: 45.0°
D - Segment: 1442-1455 - Tilt: 33.7°
D - Segment: 1468-1481 - Tilt: 8.0°
D - Segment: 1526-1542 - Tilt: 40.8°
D - Segment: 1563-1576 - Tilt: 15.8°
D - Segment: 1591-1607 - Tilt: 41.4°
D - Segment: 1627-1643 - Tilt: 40.2°
D - Segment: 1647-1661 - Tilt: 36.0°
Structural assessment:
MAIDEN score = -139.8107
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]